Glass brain plotting in nilearn#

See Plotting brain images for more plotting functionalities.

Load data#

from nilearn import datasets

stat_img = datasets.load_sample_motor_activation_image()

Glass brain plotting: whole brain sagittal cuts#

from nilearn import plotting

plotting.plot_glass_brain(stat_img, threshold=3)
plot demo glass brain
<nilearn.plotting.displays._projectors.OrthoProjector object at 0x7f30b26cd6d0>

Glass brain plotting: black background#

On a black background (option “black_bg”), and with only the x and the z view (option “display_mode”).

plotting.plot_glass_brain(
    stat_img,
    title="plot_glass_brain",
    black_bg=True,
    display_mode="xz",
    threshold=3,
)
plot demo glass brain
<nilearn.plotting.displays._projectors.XZProjector object at 0x7f30b7e1b650>

Glass brain plotting: Hemispheric sagittal cuts#

plotting.plot_glass_brain(
    stat_img,
    title='plot_glass_brain with display_mode="lyrz"',
    display_mode="lyrz",
    threshold=3,
)

plotting.show()
plot demo glass brain

Total running time of the script: (0 minutes 3.240 seconds)

Estimated memory usage: 15 MB

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