Note
Go to the end to download the full example code. or to run this example in your browser via Binder
Glass brain plotting in nilearn¶
See Plotting brain images for more plotting functionalities.
Load data¶
from nilearn import datasets
stat_img = datasets.load_sample_motor_activation_image()
Glass brain plotting: whole brain sagittal cuts¶
from nilearn import plotting
plotting.plot_glass_brain(stat_img, threshold=3)
<nilearn.plotting.displays._projectors.OrthoProjector object at 0x7ff5ac170580>
Glass brain plotting: black background¶
On a black background (option “black_bg”), and with only the x and the z view (option “display_mode”).
plotting.plot_glass_brain(
stat_img,
title="plot_glass_brain",
black_bg=True,
display_mode="xz",
threshold=3,
)
<nilearn.plotting.displays._projectors.XZProjector object at 0x7ff5abd9bcd0>
Glass brain plotting: Hemispheric sagittal cuts¶
plotting.plot_glass_brain(
stat_img,
title='plot_glass_brain with display_mode="lyrz"',
display_mode="lyrz",
threshold=3,
)
plotting.show()
Total running time of the script: (0 minutes 2.818 seconds)
Estimated memory usage: 118 MB
