Note
Go to the end to download the full example code. or to run this example in your browser via Binder
Functional connectivity predicts age group¶
This example compares different kinds of functional connectivity between regions of interest : correlation, partial correlation, and tangent space embedding.
The resulting connectivity coefficients can be used to discriminate children from adults. In general, the tangent space embedding outperforms the standard correlations: see Dadi et al.[1] for a careful study.
try:
import matplotlib.pyplot as plt
except ImportError as e:
raise RuntimeError("This script needs the matplotlib library") from e
Load brain development fMRI dataset and MSDL atlas¶
We study only 60 subjects from the dataset, to save computation time.
from nilearn.datasets import fetch_atlas_msdl, fetch_development_fmri
development_dataset = fetch_development_fmri(n_subjects=60)
[fetch_development_fmri] Dataset directory found:
/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri
[fetch_development_fmri] Dataset directory found:
/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri
[fetch_development_fmri] Dataset directory found:
/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri
We use probabilistic regions of interest (ROIs) from the MSDL atlas.
from nilearn.maskers import NiftiMapsMasker
msdl_data = fetch_atlas_msdl()
msdl_coords = msdl_data.region_coords
masker = NiftiMapsMasker(
msdl_data.maps,
resampling_target="data",
t_r=development_dataset.t_r,
detrend=True,
low_pass=0.1,
high_pass=0.01,
memory="nilearn_cache",
memory_level=1,
standardize_confounds=True,
verbose=1,
)
masked_data = list(
map(
masker.fit_transform,
development_dataset.func,
development_dataset.confounds,
)
)
[fetch_atlas_msdl] Dataset directory found:
/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar135_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d61705b0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar135_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar123_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd9c7d00>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar123_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar124_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8126682290>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar124_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar125_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8126683b20>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar125_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar126_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8126683b20>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar126_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar127_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f81289b9780>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar127_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar134_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8128251c90>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar134_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar129_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8128251840>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar129_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar130_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8128251ab0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar130_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar131_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8128251600>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar131_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar132_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd9c7d30>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar132_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar133_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d33dbc10>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar133_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar128_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8126bbb910>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar128_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar032_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8128251d50>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar032_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar033_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8128251420>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar033_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar034_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80fc467610>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar034_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar035_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d33d8100>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar035_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar036_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d33daf80>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar036_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar037_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f81289b9b70>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar037_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar038_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80fc464d30>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar038_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar041_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd33e5f0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar041_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar040_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd33c760>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar040_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar042_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd33caf0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar042_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar043_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8128251c00>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar043_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar044_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8128251c00>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar044_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar031_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd33d780>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar031_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar046_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd33e290>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar046_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar047_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd33c760>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar047_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar039_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd9c7d30>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar039_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar045_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d6173250>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar045_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar001_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8126682290>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar001_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar028_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d33dada0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar028_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar002_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8126683d30>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar002_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar003_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d21c3e50>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar003_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar004_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd33f580>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar004_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar005_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d21c0a60>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar005_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar006_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d33dada0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar006_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar007_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d21c3fa0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar007_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar008_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd33cf70>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar008_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar009_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f810e4d7df0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar009_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar010_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f810e4d7c10>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar010_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar011_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f810e4d7c10>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar011_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar012_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f810e4d4280>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar012_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar013_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f8126682290>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar013_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar029_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd9c7df0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar029_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar014_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd33dde0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar014_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar016_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd33c7f0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar016_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar017_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd33cee0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar017_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar018_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f810e4d44f0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar018_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar019_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd33c7f0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar019_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar020_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d21c2aa0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar020_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar021_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d21c3610>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar021_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar022_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d4436410>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar022_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar023_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d4437d90>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar023_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar024_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d4436e90>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar024_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar025_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d4437250>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar025_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar026_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d4437430>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar026_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar027_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80fbe1a980>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar027_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar015_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80d4437fa0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar015_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar030_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f80dd33d840>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar030_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
What kind of connectivity is most powerful for classification?¶
we will use connectivity matrices as features to distinguish children from adults. We use cross-validation and measure classification accuracy to compare the different kinds of connectivity matrices.
# prepare the classification pipeline
from sklearn.dummy import DummyClassifier
from sklearn.model_selection import GridSearchCV
from sklearn.pipeline import Pipeline
from sklearn.svm import LinearSVC
from nilearn.connectome import ConnectivityMeasure
kinds = ["correlation", "partial correlation", "tangent"]
pipe = Pipeline(
[
(
"connectivity",
ConnectivityMeasure(
vectorize=True,
),
),
(
"classifier",
GridSearchCV(
LinearSVC(dual=True, random_state=0),
{"C": [0.1, 1.0, 10.0]},
cv=5,
),
),
]
)
param_grid = [
{"classifier": [DummyClassifier(strategy="most_frequent")]},
{"connectivity__kind": kinds},
]
We use random splits of the subjects into training/testing sets. StratifiedShuffleSplit allows preserving the proportion of children in the test set.
from sklearn.model_selection import StratifiedShuffleSplit
from sklearn.preprocessing import LabelEncoder
groups = development_dataset.phenotypic["Child_Adult"].to_list()
classes = LabelEncoder().fit_transform(groups)
cv = StratifiedShuffleSplit(n_splits=30, random_state=0, test_size=10)
gs = GridSearchCV(
pipe,
param_grid,
scoring="accuracy",
cv=cv,
refit=False,
n_jobs=2,
)
gs.fit(masked_data, classes)
mean_scores = gs.cv_results_["mean_test_score"]
scores_std = gs.cv_results_["std_test_score"]
display the results
plt.figure(figsize=(6, 4), constrained_layout=True)
positions = [0.1, 0.2, 0.3, 0.4]
plt.barh(positions, mean_scores, align="center", height=0.05, xerr=scores_std)
yticks = ["dummy", *list(gs.cv_results_["param_connectivity__kind"].data[1:])]
yticks = [t.replace(" ", "\n") for t in yticks]
plt.yticks(positions, yticks)
plt.xlabel("Classification accuracy")
plt.gca().grid(True)
plt.gca().set_axisbelow(True)

This is a small example to showcase nilearn features. In practice such comparisons need to be performed on much larger cohorts and several datasets. Dadi et al.[1] showed that across many cohorts and clinical questions, the tangent kind should be preferred.
plt.show()
References¶
Total running time of the script: (1 minutes 27.669 seconds)
Estimated memory usage: 1350 MB