Note
Go to the end to download the full example code. or to run this example in your browser via Binder
Functional connectivity predicts age group¶
This example compares different kinds of functional connectivity between regions of interest : correlation, partial correlation, and tangent space embedding.
The resulting connectivity coefficients can be used to discriminate children from adults. In general, the tangent space embedding outperforms the standard correlations: see Dadi et al.[1] for a careful study.
try:
import matplotlib.pyplot as plt
except ImportError as e:
raise RuntimeError("This script needs the matplotlib library") from e
Load brain development fMRI dataset and MSDL atlas¶
We study only 60 subjects from the dataset, to save computation time.
from nilearn.datasets import fetch_atlas_msdl, fetch_development_fmri
development_dataset = fetch_development_fmri(n_subjects=60)
[fetch_development_fmri] Dataset directory found:
/home/runner/nilearn_data/development_fmri
[fetch_development_fmri] Dataset directory found:
/home/runner/nilearn_data/development_fmri/development_fmri
[fetch_development_fmri] Dataset directory found:
/home/runner/nilearn_data/development_fmri/development_fmri
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3f72286e80019c3c1af/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3f92286e80018c3e463/ ...
[fetch_development_fmri] ...done. (2 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3f6a743a90017608171/ ...
[fetch_development_fmri] ...done. (2 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3f64712b400183b70d8/ ...
[fetch_development_fmri] ...done. (2 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3eb2286e80019c3c198/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3ed2286e80017c41b56/ ...
[fetch_development_fmri] ...done. (6 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3ee2286e80016c3c379/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3ee4712b400183b70c3/ ...
[fetch_development_fmri] ...done. (2 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3efa743a9001660a0d5/ ...
[fetch_development_fmri] ...done. (7 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3f14712b4001a3b560e/ ...
[fetch_development_fmri] ...done. (5 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3f1a743a90017608164/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3f12286e80016c3c37e/ ...
[fetch_development_fmri] ...done. (2 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3f34712b4001a3b5612/ ...
[fetch_development_fmri] ...done. (7 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3f7a743a90019606cdf/ ...
[fetch_development_fmri] ...done. (2 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb470153992690018133d3b/ ...
[fetch_development_fmri] ...done. (8 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb46e793992690017108eb9/ ...
[fetch_development_fmri] ...done. (5 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb47038353c5800199ac9a2/ ...
[fetch_development_fmri] ...done. (7 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb46e85a3bc97001aeff750/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb4701c3992690018133d49/ ...
[fetch_development_fmri] ...done. (7 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb46e1c3992690018133a9e/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff39aa743a900176080bf/ ...
[fetch_development_fmri] ...done. (6 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff39d4712b400193b5b89/ ...
[fetch_development_fmri] ...done. (2 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb4703039926900160f6b3e/ ...
[fetch_development_fmri] ...done. (8 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb46e4d353c58001b9cb325/ ...
[fetch_development_fmri] ...done. (5 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb4700af2be3c0017056f69/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb46e0cf2be3c001801f757/ ...
[fetch_development_fmri] ...done. (5 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb4702b39926900171090e4/ ...
[fetch_development_fmri] ...done. (8 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb46e35f2be3c00190305ff/ ...
[fetch_development_fmri] ...done. (2 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3a12286e80017c41a48/ ...
[fetch_development_fmri] ...done. (4 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3a12286e80016c3c2fc/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb4701ff2be3c0017056fad/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb46e0339926900160f6930/ ...
[fetch_development_fmri] ...done. (4 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff39fa743a90018606e2f/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3a34712b4001a3b55a3/ ...
[fetch_development_fmri] ...done. (5 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb4703439926900160f6b43/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb46e40f2be3c001801f77f/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3a34712b400193b5b92/ ...
[fetch_development_fmri] ...done. (5 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3a84712b400183b7048/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff39aa743a90018606e21/ ...
[fetch_development_fmri] ...done. (7 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff39aa743a900176080ba/ ...
[fetch_development_fmri] ...done. (5 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3a72286e80017c41a54/ ...
[fetch_development_fmri] ...done. (6 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3a7a743a90018606e42/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb4702639926900190faf1d/ ...
[fetch_development_fmri] ...done. (6 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb46e3f353c5800199ac787/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff39ca743a90019606c50/ ...
[fetch_development_fmri] ...done. (2 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3a2a743a9001660a048/ ...
[fetch_development_fmri] ...done. (4 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb47020f2be3c0019030968/ ...
[fetch_development_fmri] ...done. (3 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb46e6f353c58001a9b3311/ ...
[fetch_development_fmri] ...done. (4 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb47016a3bc970018f1fc88/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb46e6ba3bc970019f07152/ ...
[fetch_development_fmri] ...done. (4 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff395a743a900176080af/ ...
[fetch_development_fmri] ...done. (2 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3964712b400193b5b7d/ ...
[fetch_development_fmri] ...done. (8 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb47057f2be3c0019030a1f/ ...
[fetch_development_fmri] ...done. (4 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb46e63f2be3c0017056ba9/ ...
[fetch_development_fmri] ...done. (2 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb4704af2be3c001705703b/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5cb46e7a353c58001a9b3324/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3952286e80016c3c2e7/ ...
[fetch_development_fmri] ...done. (1 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3954712b400193b5b79/ ...
[fetch_development_fmri] ...done. (2 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff399a743a9001660a031/ ...
[fetch_development_fmri] ...done. (4 seconds, 0 min)
[fetch_development_fmri] Downloading data from
https://osf.io/download/5c8ff3982286e80017c41a29/ ...
[fetch_development_fmri] ...done. (5 seconds, 0 min)
We use probabilistic regions of interest (ROIs) from the MSDL atlas.
from nilearn.maskers import NiftiMapsMasker
msdl_data = fetch_atlas_msdl()
msdl_coords = msdl_data.region_coords
masker = NiftiMapsMasker(
msdl_data.maps,
resampling_target="data",
t_r=development_dataset.t_r,
detrend=True,
low_pass=0.1,
high_pass=0.01,
memory="nilearn_cache",
memory_level=1,
standardize_confounds=True,
verbose=1,
)
masked_data = list(
map(
masker.fit_transform,
development_dataset.func,
development_dataset.confounds,
)
)
[fetch_atlas_msdl] Dataset directory found: /home/runner/nilearn_data/msdl_atlas
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar135_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18beb568f0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar135_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar123_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18beb576a0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar123_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar124_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18beb54a30>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar124_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar125_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ea4c3b20>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar125_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar126_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18eabc4160>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar126_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar127_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d867e950>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar127_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar134_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d867ffd0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar134_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar129_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18beb558a0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar129_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar130_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ea4c1f90>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar130_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar131_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ea4c3790>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar131_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar132_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ea4c2fe0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar132_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar133_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ea4c1fc0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar133_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar128_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d867e680>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar128_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar032_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18eac9df00>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar032_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar033_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ea4c1510>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar033_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar034_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ea4c0100>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar034_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar035_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d867cf10>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar035_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar036_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d867e680>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar036_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar037_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18bea5d990>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar037_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar038_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18bea5d720>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar038_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar041_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d867dba0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar041_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar040_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18eac9cb20>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar040_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar042_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ea4c28f0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar042_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar043_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ea4c2fe0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar043_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar044_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18beabf7f0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar044_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar031_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18eac9efb0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar031_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar046_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d867d4e0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar046_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar047_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18beabfbb0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar047_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar039_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18beabd2d0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar039_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar045_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ea4c1c60>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar045_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar001_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ced4f4f0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar001_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar028_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18beabcd60>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar028_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar002_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18bea5da20>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar002_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar003_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18beabf1c0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar003_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar004_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18bea5e950>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar004_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar005_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ea4c1b40>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar005_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar006_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ced4f310>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar006_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar007_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ced4dab0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar007_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar008_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18bea5e950>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar008_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar009_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ea4c3ca0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar009_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar010_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d1a952a0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar010_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar011_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18bea5d390>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar011_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar012_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18beabc4c0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar012_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar013_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d867e590>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar013_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar029_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d1a951e0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar029_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar014_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d867f910>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar014_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar016_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d1a94490>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar016_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar017_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18beabf7f0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar017_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar018_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ced4c8b0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar018_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar019_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ba1f4fd0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar019_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar020_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ba1f6e00>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar020_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar021_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18beabc4c0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar021_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar022_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18beb54880>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar022_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar023_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18ba1f6590>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar023_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar024_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d1a94280>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar024_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar025_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18bea5e950>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar025_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar026_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18eac9d660>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar026_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar027_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d867d510>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar027_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar015_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d1a952a0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar015_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from
'/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/nilearn_data/development_fmri/development_fmri/sub-pixar030_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f18d867d510>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/nilearn_data/developm
ent_fmri/development_fmri/sub-pixar030_task-pixar_space-MNI152NLin2009cAsym_desc
-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.8s, 0.0min
What kind of connectivity is most powerful for classification?¶
we will use connectivity matrices as features to distinguish children from adults. We use cross-validation and measure classification accuracy to compare the different kinds of connectivity matrices.
# prepare the classification pipeline
from sklearn.dummy import DummyClassifier
from sklearn.model_selection import GridSearchCV
from sklearn.pipeline import Pipeline
from sklearn.svm import LinearSVC
from nilearn.connectome import ConnectivityMeasure
kinds = ["correlation", "partial correlation", "tangent"]
pipe = Pipeline(
[
(
"connectivity",
ConnectivityMeasure(
vectorize=True,
),
),
(
"classifier",
GridSearchCV(
LinearSVC(dual=True, random_state=0),
{"C": [0.1, 1.0, 10.0]},
cv=5,
),
),
]
)
param_grid = [
{"classifier": [DummyClassifier(strategy="most_frequent")]},
{"connectivity__kind": kinds},
]
We use random splits of the subjects into training/testing sets. StratifiedShuffleSplit allows preserving the proportion of children in the test set.
from sklearn.model_selection import StratifiedShuffleSplit
from sklearn.preprocessing import LabelEncoder
groups = development_dataset.phenotypic["Child_Adult"].to_list()
classes = LabelEncoder().fit_transform(groups)
cv = StratifiedShuffleSplit(n_splits=30, random_state=0, test_size=10)
gs = GridSearchCV(
pipe,
param_grid,
scoring="accuracy",
cv=cv,
refit=False,
n_jobs=2,
)
gs.fit(masked_data, classes)
mean_scores = gs.cv_results_["mean_test_score"]
scores_std = gs.cv_results_["std_test_score"]
display the results
plt.figure(figsize=(6, 4), constrained_layout=True)
positions = [0.1, 0.2, 0.3, 0.4]
plt.barh(positions, mean_scores, align="center", height=0.05, xerr=scores_std)
yticks = ["dummy", *list(gs.cv_results_["param_connectivity__kind"].data[1:])]
yticks = [t.replace(" ", "\n") for t in yticks]
plt.yticks(positions, yticks)
plt.xlabel("Classification accuracy")
plt.gca().grid(True)
plt.gca().set_axisbelow(True)

This is a small example to showcase nilearn features. In practice such comparisons need to be performed on much larger cohorts and several datasets. Dadi et al.[1] showed that across many cohorts and clinical questions, the tangent kind should be preferred.
plt.show()
References¶
Total running time of the script: (4 minutes 52.440 seconds)
Estimated memory usage: 1045 MB