Note
Go to the end to download the full example code. or to run this example in your browser via Binder
Functional connectivity predicts age group¶
This example compares different kinds of functional connectivity between regions of interest : correlation, partial correlation, and tangent space embedding.
The resulting connectivity coefficients can be used to discriminate children from adults. In general, the tangent space embedding outperforms the standard correlations: see Dadi et al.[1] for a careful study.
try:
import matplotlib.pyplot as plt
except ImportError as e:
raise RuntimeError("This script needs the matplotlib library") from e
Load brain development fMRI dataset and MSDL atlas¶
We study only 60 subjects from the dataset, to save computation time.
from nilearn.datasets import fetch_atlas_msdl, fetch_development_fmri
development_dataset = fetch_development_fmri(n_subjects=60)
[fetch_development_fmri] Dataset directory found:
/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri
[fetch_development_fmri] Dataset directory found:
/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri
[fetch_development_fmri] Dataset directory found:
/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri
We use probabilistic regions of interest (ROIs) from the MSDL atlas.
from nilearn.maskers import NiftiMapsMasker
msdl_data = fetch_atlas_msdl()
msdl_coords = msdl_data.region_coords
masker = NiftiMapsMasker(
msdl_data.maps,
resampling_target="data",
t_r=development_dataset.t_r,
detrend=True,
low_pass=0.1,
high_pass=0.01,
memory="nilearn_cache",
memory_level=1,
standardize_confounds=True,
verbose=1,
)
masked_data = list(
map(
masker.fit_transform,
development_dataset.func,
development_dataset.confounds,
)
)
[fetch_atlas_msdl] Dataset directory found:
/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar135_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1b4e0f70>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar135_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar123_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29febb80>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar123_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar124_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29b0d930>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar124_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar125_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad23a2b90>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar125_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar126_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29b0eef0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar126_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar127_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29feb550>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar127_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar134_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad6c18940>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar134_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar129_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29feb790>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar129_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar130_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29feb6a0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar130_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar131_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1ad64a90>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar131_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar132_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1ad64a90>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar132_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar133_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad6c1ad10>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar133_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar128_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad6c1b4f0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar128_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar032_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad6c1a1a0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar032_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar033_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29b0eef0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar033_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar034_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b28211030>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar034_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar035_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29feadd0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar035_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar036_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1ad649d0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar036_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar037_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29b0eef0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar037_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar038_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29feb550>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar038_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar041_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1ba311e0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar041_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar040_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29feafe0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar040_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar042_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad6c1ac50>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar042_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar043_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29feb790>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar043_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar044_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad6c19b70>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar044_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar031_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1ba32350>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar031_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar046_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1ba328c0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar046_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar047_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29feb070>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar047_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar039_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29feb3d0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar039_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar045_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29febe80>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar045_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar001_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1ba32bf0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar001_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar028_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1ad649d0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar028_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar002_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1ad64670>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar002_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 1.0s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar003_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad6c187c0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar003_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar004_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad6c19d50>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar004_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar005_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29feb3d0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar005_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar006_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad6c18f40>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar006_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 1.0s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar007_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad6c19420>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar007_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar008_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad6c19420>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar008_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar009_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2afd9be650>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar009_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar010_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2afd9bc640>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar010_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar011_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2afd9bdc60>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar011_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar012_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2afd9bd990>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar012_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar013_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2afd9beaa0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar013_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar029_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2afd9bef20>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar029_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar014_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2afd9bc550>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar014_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar016_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29b0eef0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar016_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar017_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29b0d930>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar017_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar018_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2afd9bc4f0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar018_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar019_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2afd9bfb20>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar019_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar020_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad6c1a3e0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar020_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar021_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29b0d930>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar021_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar022_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b0275a7d0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar022_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar023_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1ba31ab0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar023_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar024_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1ba32860>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar024_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar025_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1ba33dc0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar025_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar026_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b1ba337f0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar026_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 1.0s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar027_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b02758490>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar027_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar015_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2b29feb3d0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar015_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
\[NiftiMapsMasker.wrapped] Loading regions from '/home/runner/work/nilearn/nilea
rn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii'
\[NiftiMapsMasker.wrapped] Resampling regions
\[NiftiMapsMasker.wrapped] Finished fit
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
________________________________________________________________________________
[Memory] Calling nilearn.maskers.base_masker.filter_and_extract...
filter_and_extract('/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/development_fmri/sub-pixar030_task-pixar_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz',
<nilearn.maskers.nifti_maps_masker._ExtractionFunctor object at 0x7f2ad6c19ea0>, { 'allow_overlap': True,
'clean_args': None,
'clean_kwargs': {},
'cmap': 'CMRmap_r',
'detrend': True,
'dtype': None,
'high_pass': 0.01,
'high_variance_confounds': False,
'keep_masked_maps': False,
'low_pass': 0.1,
'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii',
'mask_img': None,
'reports': True,
'smoothing_fwhm': None,
'standardize': False,
'standardize_confounds': True,
't_r': 2,
'target_affine': None,
'target_shape': None}, confounds=None, sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None)
\[NiftiMapsMasker.wrapped] Loading data from '/home/runner/work/nilearn/nilearn/
nilearn_data/development_fmri/development_fmri/sub-pixar030_task-pixar_space-MNI
152NLin2009cAsym_desc-preproc_bold.nii.gz'
\[NiftiMapsMasker.wrapped] Extracting region signals
\[NiftiMapsMasker.wrapped] Cleaning extracted signals
/home/runner/work/nilearn/nilearn/examples/07_advanced/plot_age_group_prediction_cross_val.py:50: FutureWarning:
boolean values for 'standardize' will be deprecated in nilearn 0.15.0.
Use 'zscore_sample' instead of 'True' or use 'None' instead of 'False'.
_______________________________________________filter_and_extract - 0.9s, 0.0min
What kind of connectivity is most powerful for classification?¶
we will use connectivity matrices as features to distinguish children from adults. We use cross-validation and measure classification accuracy to compare the different kinds of connectivity matrices.
# prepare the classification pipeline
from sklearn.dummy import DummyClassifier
from sklearn.model_selection import GridSearchCV
from sklearn.pipeline import Pipeline
from sklearn.svm import LinearSVC
from nilearn.connectome import ConnectivityMeasure
kinds = ["correlation", "partial correlation", "tangent"]
pipe = Pipeline(
[
(
"connectivity",
ConnectivityMeasure(
vectorize=True,
),
),
(
"classifier",
GridSearchCV(
LinearSVC(dual=True, random_state=0),
{"C": [0.1, 1.0, 10.0]},
cv=5,
),
),
]
)
param_grid = [
{"classifier": [DummyClassifier(strategy="most_frequent")]},
{"connectivity__kind": kinds},
]
We use random splits of the subjects into training/testing sets. StratifiedShuffleSplit allows preserving the proportion of children in the test set.
from sklearn.model_selection import StratifiedShuffleSplit
from sklearn.preprocessing import LabelEncoder
groups = development_dataset.phenotypic["Child_Adult"].to_list()
classes = LabelEncoder().fit_transform(groups)
cv = StratifiedShuffleSplit(n_splits=30, random_state=0, test_size=10)
gs = GridSearchCV(
pipe,
param_grid,
scoring="accuracy",
cv=cv,
refit=False,
n_jobs=2,
)
gs.fit(masked_data, classes)
mean_scores = gs.cv_results_["mean_test_score"]
scores_std = gs.cv_results_["std_test_score"]
display the results
plt.figure(figsize=(6, 4), constrained_layout=True)
positions = [0.1, 0.2, 0.3, 0.4]
plt.barh(positions, mean_scores, align="center", height=0.05, xerr=scores_std)
yticks = ["dummy", *list(gs.cv_results_["param_connectivity__kind"].data[1:])]
yticks = [t.replace(" ", "\n") for t in yticks]
plt.yticks(positions, yticks)
plt.xlabel("Classification accuracy")
plt.gca().grid(True)
plt.gca().set_axisbelow(True)

This is a small example to showcase nilearn features. In practice such comparisons need to be performed on much larger cohorts and several datasets. Dadi et al.[1] showed that across many cohorts and clinical questions, the tangent kind should be preferred.
plt.show()
References¶
Total running time of the script: (1 minutes 34.471 seconds)
Estimated memory usage: 1299 MB