Examples of GLM reports

First level report

ADHD

Adapted from Default Mode Network extraction of ADHD dataset

Nilearn - Statistical Report - First Level Model<br>ADHD DMN Report

Statistical Report - First Level Model
ADHD DMN Report Implement the General Linear Model for single run :term:`fMRI` data.

Description

Data were analyzed using Nilearn (version= 0.11.2.dev245+geee20d69f; RRID:SCR_001362).

At the subject level, a mass univariate analysis was performed with a linear regression at each voxel of the brain, using generalized least squares with a global ar1 noise model to account for temporal auto-correlation and a cosine drift model (high pass filter=0.01 Hz).

Model details

Value
Parameter
drift_model cosine
high_pass (Hertz) 0.01
hrf_model glover
noise_model ar1
signal_scaling 0
slice_time_ref 0.0
standardize False
t_r (seconds) 2.0

Design Matrix

run 0

Plot of design matrix for 0.

correlation matrix

Plot of correlation of design matrix for run 0.

Contrasts

Plot of the contrast seed_based_glm (run 0).

Mask

Mask image

Statistical Maps

seed_based_glm

Stat map plot for the contrast: seed_based_glm
Cluster Table
Height control bonferroni
α 9.00E-4
Threshold (computed) 5.669
Cluster size threshold (voxels) 15
Minimum distance (mm) 8.0
Cluster ID X Y Z Peak Stat Cluster Size (mm3)
1 3.0 -54.0 18.0 13.01 12393
1a 0.0 -57.0 30.0 12.68
1b 0.0 -48.0 30.0 11.96
1c -3.0 -51.0 18.0 11.91
2 0.0 51.0 -6.0 11.08 5562
2a 3.0 69.0 3.0 10.62
2b 0.0 57.0 3.0 10.31
2c 0.0 63.0 15.0 10.12
3 57.0 -66.0 27.0 10.91 1188
3a 48.0 -57.0 30.0 8.99
3b 51.0 -69.0 27.0 8.51
4 6.0 -84.0 -18.0 10.68 756
4a -3.0 -87.0 -15.0 7.59
5 18.0 42.0 51.0 9.99 513
6 -63.0 -12.0 -9.0 9.20 540
6a -63.0 -18.0 -15.0 9.05
7 -48.0 -69.0 42.0 8.93 486
7a -54.0 -66.0 36.0 8.71
8 -42.0 -72.0 33.0 8.72 729
9 -12.0 39.0 54.0 8.52 432
9a -15.0 30.0 51.0 7.87
10 -24.0 30.0 48.0 8.51 648
10a -18.0 30.0 42.0 8.39
11 -36.0 -54.0 -24.0 8.04 756
11a -45.0 -54.0 -21.0 7.61
12 -51.0 -60.0 24.0 7.50 837

About

  • Date preprocessed:

BIDS features

Adapted from First level analysis of a complete BIDS dataset from openneuro

Nilearn - Statistical Report - First Level Model<br>FLM Bids Features Stat maps

Statistical Report - First Level Model
FLM Bids Features Stat maps Implement the General Linear Model for single run :term:`fMRI` data.

Description

Data were analyzed using Nilearn (version= 0.11.2.dev245+geee20d69f; RRID:SCR_001362).

At the subject level, a mass univariate analysis was performed with a linear regression at each voxel of the brain, using generalized least squares with a global ar1 noise model to account for temporal auto-correlation and a cosine drift model (high pass filter=0.01 Hz).

Input images were smoothed with gaussian kernel (full-width at half maximum=5.0 mm).

The following contrasts were computed using a fixed-effect approach across runs :

  • StopSuccess - Go

Model details

Value
Parameter
drift_model cosine
high_pass (Hertz) 0.01
hrf_model glover
noise_model ar1
signal_scaling 0
slice_time_ref 0.0
smoothing_fwhm (mm) 5.0
standardize False
subject_label 10159
t_r (seconds) 2

Design Matrix

run 0

Plot of design matrix for 0.

correlation matrix

Plot of correlation of design matrix for run 0.

Contrasts

Plot of the contrast StopSuccess - Go (run 0).

Mask

Mask image

Statistical Maps

StopSuccess - Go

Stat map plot for the contrast: StopSuccess - Go
Cluster Table
Height control fpr
α 0.001
Threshold (computed) 3.291
Cluster size threshold (voxels) 3
Minimum distance (mm) 8.0
Cluster ID X Y Z Peak Stat Cluster Size (mm3)
1 -66.0 -45.0 22.0 5.31 4176
1a -66.0 -33.0 18.0 4.67
1b -48.0 -36.0 14.0 4.53
1c -60.0 -30.0 10.0 4.11
2 -42.0 15.0 26.0 4.92 2196
2a -51.0 9.0 34.0 4.72
2b -42.0 9.0 30.0 4.68
2c -57.0 12.0 38.0 4.59
3 -45.0 -12.0 26.0 4.84 144
4 57.0 -27.0 2.0 4.69 324
4a 66.0 -27.0 2.0 3.66
5 54.0 9.0 14.0 4.65 144
6 -66.0 -30.0 6.0 4.51 144
7 -6.0 -15.0 34.0 4.47 108
8 42.0 9.0 34.0 4.46 324
9 36.0 15.0 10.0 4.32 216
10 -60.0 -27.0 -2.0 4.32 108
11 6.0 18.0 34.0 4.26 1116
12 -57.0 -48.0 10.0 4.25 828
13 6.0 6.0 54.0 4.21 180
14 -45.0 21.0 2.0 4.19 216
14a -54.0 21.0 6.0 3.39
15 45.0 -21.0 42.0 4.16 288
16 63.0 -9.0 2.0 4.16 180
17 63.0 -24.0 30.0 4.08 288
18 -3.0 15.0 46.0 4.08 432
18a 3.0 9.0 50.0 3.80
19 -12.0 6.0 6.0 4.06 540
19a -9.0 -3.0 10.0 3.73
19b -9.0 6.0 14.0 3.71
20 -30.0 24.0 2.0 4.05 216
21 6.0 -3.0 74.0 4.05 108
22 -27.0 45.0 18.0 4.04 216
23 54.0 -39.0 34.0 4.02 108
24 -15.0 -66.0 38.0 3.99 252
25 -18.0 -63.0 6.0 3.99 144
26 3.0 -24.0 30.0 3.95 288
27 12.0 -72.0 22.0 3.94 216
28 36.0 -48.0 -26.0 3.93 108
29 33.0 42.0 34.0 3.91 504
29a 30.0 45.0 26.0 3.88
30 9.0 6.0 6.0 3.88 108
31 -12.0 -24.0 10.0 3.82 144
32 0.0 0.0 38.0 3.82 108
33 51.0 -30.0 14.0 3.78 252
34 -54.0 -57.0 -2.0 3.77 108
35 -9.0 15.0 34.0 3.67 144
36 51.0 -24.0 10.0 3.65 108
37 15.0 -30.0 2.0 3.39 144

About

  • Date preprocessed:

FIAC

Adapted from Simple example of two-runs fMRI model fitting

Nilearn - Statistical Report - First Level Model

Statistical Report - First Level Model Implement the General Linear Model for single run :term:`fMRI` data.

Description

Data were analyzed using Nilearn (version= 0.11.2.dev245+geee20d69f; RRID:SCR_001362).

At the subject level, a mass univariate analysis was performed with a linear regression at each voxel of the brain, using generalized least squares with a global ar1 noise model to account for temporal auto-correlation and a cosine drift model (high pass filter=0.01 Hz).

Model details

Value
Parameter
drift_model cosine
high_pass (Hertz) 0.01
hrf_model glover
noise_model ar1
signal_scaling 0
slice_time_ref 0.0
standardize False

Design Matrix

run 0

Plot of design matrix for 0.

correlation matrix

Plot of correlation of design matrix for run 0.

run 1

Plot of design matrix for 1.

correlation matrix

Plot of correlation of design matrix for run 1.

Contrasts

Plot of the contrast SStSSp_minus_DStDSp (run 0).
Plot of the contrast DStDSp_minus_SStSSp (run 0).
Plot of the contrast DSt_minus_SSt (run 0).
Plot of the contrast DSp_minus_SSp (run 0).
Plot of the contrast DSt_minus_SSt_for_DSp (run 0).
Plot of the contrast DSp_minus_SSp_for_DSt (run 0).
Plot of the contrast Deactivation (run 0).
Plot of the contrast Effects_of_interest (run 0).
Plot of the contrast SStSSp_minus_DStDSp (run 1).
Plot of the contrast DStDSp_minus_SStSSp (run 1).
Plot of the contrast DSt_minus_SSt (run 1).
Plot of the contrast DSp_minus_SSp (run 1).
Plot of the contrast DSt_minus_SSt_for_DSp (run 1).
Plot of the contrast DSp_minus_SSp_for_DSt (run 1).
Plot of the contrast Deactivation (run 1).
Plot of the contrast Effects_of_interest (run 1).

Mask

Mask image

Statistical Maps

SStSSp_minus_DStDSp

Stat map plot for the contrast: SStSSp_minus_DStDSp
Cluster Table
Height control fdr
α 0.001
Threshold (computed) inf
Cluster size threshold (voxels) 0
Minimum distance (mm) 8.0
Cluster ID X Y Z Peak Stat Cluster Size (mm3)

DStDSp_minus_SStSSp

Stat map plot for the contrast: DStDSp_minus_SStSSp
Cluster Table
Height control fdr
α 0.001
Threshold (computed) inf
Cluster size threshold (voxels) 0
Minimum distance (mm) 8.0
Cluster ID X Y Z Peak Stat Cluster Size (mm3)

DSt_minus_SSt

Stat map plot for the contrast: DSt_minus_SSt
Cluster Table
Height control fdr
α 0.001
Threshold (computed) 5.612
Cluster size threshold (voxels) 0
Minimum distance (mm) 8.0
Cluster ID X Y Z Peak Stat Cluster Size (mm3)

DSp_minus_SSp

Stat map plot for the contrast: DSp_minus_SSp
Cluster Table
Height control fdr
α 0.001
Threshold (computed) inf
Cluster size threshold (voxels) 0
Minimum distance (mm) 8.0
Cluster ID X Y Z Peak Stat Cluster Size (mm3)

DSt_minus_SSt_for_DSp

Stat map plot for the contrast: DSt_minus_SSt_for_DSp
Cluster Table
Height control fdr
α 0.001
Threshold (computed) inf
Cluster size threshold (voxels) 0
Minimum distance (mm) 8.0
Cluster ID X Y Z Peak Stat Cluster Size (mm3)

DSp_minus_SSp_for_DSt

Stat map plot for the contrast: DSp_minus_SSp_for_DSt
Cluster Table
Height control fdr
α 0.001
Threshold (computed) inf
Cluster size threshold (voxels) 0
Minimum distance (mm) 8.0
Cluster ID X Y Z Peak Stat Cluster Size (mm3)

Deactivation

Stat map plot for the contrast: Deactivation
Cluster Table
Height control fdr
α 0.001
Threshold (computed) 4.9
Cluster size threshold (voxels) 0
Minimum distance (mm) 8.0
Cluster ID X Y Z Peak Stat Cluster Size (mm3)
1 -39.0 -114.0 60.0 6.01 36
2 -51.0 -57.0 56.0 5.39 36
3 -51.0 -96.0 64.0 5.38 36
4 -42.0 -93.0 64.0 5.36 72
5 -126.0 -108.0 60.0 5.35 36
6 -45.0 -93.0 52.0 5.23 36
7 -135.0 -111.0 60.0 5.21 36
8 -45.0 -60.0 60.0 5.21 36
9 -57.0 -57.0 60.0 5.00 36

Effects_of_interest

Stat map plot for the contrast: Effects_of_interest
Cluster Table
Height control fdr
α 0.001
Threshold (computed) 4.164
Cluster size threshold (voxels) 0
Minimum distance (mm) 8.0
Cluster ID X Y Z Peak Stat Cluster Size (mm3)
1 -33.0 -111.0 56.0 16.62 6408
1a -45.0 -99.0 64.0 13.71
1b -42.0 -111.0 56.0 13.50
1c -33.0 -96.0 56.0 12.10
2 -45.0 -75.0 56.0 13.99 1188
2a -42.0 -66.0 52.0 10.15
2b -51.0 -84.0 56.0 9.47
3 -138.0 -111.0 56.0 13.17 5220
3a -126.0 -117.0 56.0 11.96
3b -141.0 -105.0 48.0 11.50
3c -135.0 -96.0 48.0 11.43
4 -57.0 -90.0 48.0 9.65 540
4a -57.0 -78.0 40.0 9.43
5 -60.0 -72.0 36.0 8.94 72
6 -48.0 -57.0 56.0 8.58 1224
6a -45.0 -60.0 68.0 6.97
6b -57.0 -57.0 60.0 5.11
7 -123.0 -84.0 32.0 8.47 36
8 -126.0 -150.0 56.0 8.13 324
9 -141.0 -126.0 36.0 8.04 108
10 -135.0 -126.0 76.0 7.95 468
11 -135.0 -84.0 44.0 7.85 180
12 -87.0 -111.0 88.0 7.73 360
13 -99.0 -141.0 20.0 7.63 36
14 -96.0 -138.0 104.0 7.43 108
15 -144.0 -108.0 64.0 7.05 36
16 -60.0 -30.0 48.0 6.70 144
17 -90.0 -150.0 92.0 6.68 936
18 -114.0 -135.0 20.0 6.64 36
19 -90.0 -129.0 100.0 6.63 360
20 -117.0 -111.0 56.0 6.57 72
21 -90.0 -114.0 112.0 6.49 36
22 -126.0 -150.0 80.0 6.45 288
23 -138.0 -117.0 40.0 6.43 108
24 -120.0 -48.0 68.0 6.43 72
25 -117.0 -114.0 60.0 6.34 144
26 -117.0 -69.0 80.0 6.34 36
27 -57.0 -75.0 88.0 6.33 72
28 -138.0 -87.0 48.0 6.31 36
29 -84.0 -135.0 100.0 6.29 540
30 -57.0 -78.0 16.0 6.29 72
31 -54.0 -72.0 16.0 6.28 144
32 -93.0 -135.0 108.0 6.26 72
33 -93.0 -147.0 4.0 6.23 108
34 -108.0 -141.0 0.0 6.19 252
35 -51.0 -63.0 76.0 6.19 288
35a -60.0 -63.0 72.0 4.47
36 -99.0 -141.0 60.0 6.17 36
37 -81.0 -132.0 60.0 6.17 468
37a -84.0 -126.0 52.0 6.11
37b -84.0 -123.0 60.0 4.66
38 -45.0 -108.0 36.0 6.14 36
39 -60.0 -36.0 52.0 6.12 72
40 -69.0 -108.0 112.0 6.09 72
41 -126.0 -150.0 48.0 6.08 36
42 -129.0 -60.0 48.0 6.07 108
43 -117.0 -90.0 104.0 6.05 72
44 -93.0 -150.0 80.0 6.05 72
45 -126.0 -45.0 72.0 6.04 108
46 -141.0 -102.0 40.0 6.01 72
47 -51.0 -63.0 44.0 6.01 72
48 -93.0 -69.0 80.0 6.00 72
49 -48.0 -60.0 44.0 5.96 36
50 -144.0 -99.0 44.0 5.94 72
51 -126.0 -54.0 80.0 5.94 72
52 -66.0 -24.0 52.0 5.92 72
53 -48.0 -78.0 92.0 5.92 72
54 -141.0 -99.0 56.0 5.91 36
55 -60.0 -99.0 64.0 5.86 72
56 -120.0 -132.0 24.0 5.86 36
57 -120.0 -36.0 56.0 5.86 36
58 -60.0 -51.0 56.0 5.82 36
59 -75.0 -57.0 76.0 5.78 144
60 -72.0 -147.0 8.0 5.77 36
61 -123.0 -90.0 36.0 5.76 36
62 -78.0 -144.0 96.0 5.74 288
63 -138.0 -78.0 64.0 5.74 72
64 -132.0 -69.0 88.0 5.73 36
65 -114.0 -144.0 8.0 5.71 180
66 -102.0 -144.0 80.0 5.70 36
67 -42.0 -120.0 24.0 5.68 36
68 -141.0 -78.0 56.0 5.68 36
69 -96.0 -60.0 72.0 5.67 468
70 -48.0 -114.0 64.0 5.67 72
71 -96.0 -45.0 60.0 5.64 72
72 -126.0 -72.0 88.0 5.61 72
73 -102.0 -75.0 104.0 5.61 108
74 -120.0 -66.0 96.0 5.61 36
75 -48.0 -108.0 32.0 5.60 108
76 -102.0 -33.0 56.0 5.59 108
77 -87.0 -42.0 88.0 5.57 72
78 -96.0 -42.0 92.0 5.55 36
79 -99.0 -75.0 108.0 5.53 36
80 -108.0 -30.0 80.0 5.52 36
81 -78.0 -51.0 76.0 5.50 36
82 -135.0 -105.0 88.0 5.49 72
83 -93.0 -87.0 84.0 5.48 36
84 -111.0 -120.0 32.0 5.48 180
85 -123.0 -153.0 68.0 5.47 36
86 -123.0 -84.0 100.0 5.47 108
87 -120.0 -24.0 60.0 5.47 72
88 -78.0 -117.0 84.0 5.47 144
89 -72.0 -156.0 20.0 5.46 36
90 -99.0 -108.0 80.0 5.40 36
91 -87.0 -138.0 64.0 5.39 36
92 -135.0 -60.0 72.0 5.36 36
93 -69.0 -84.0 24.0 5.36 72
94 -114.0 -48.0 88.0 5.33 36
95 -90.0 -126.0 84.0 5.32 108
96 -63.0 -147.0 12.0 5.28 36
97 -51.0 -114.0 28.0 5.26 144
98 -105.0 -147.0 92.0 5.25 108
99 -51.0 -78.0 88.0 5.22 72
100 -54.0 -69.0 48.0 5.21 36
101 -54.0 -120.0 24.0 5.21 36
102 -120.0 -60.0 56.0 5.19 72
103 -93.0 -150.0 24.0 5.16 36
104 -90.0 -117.0 92.0 5.16 72
105 -90.0 -123.0 112.0 5.16 36
106 -138.0 -81.0 60.0 5.15 36
107 -81.0 -30.0 72.0 5.14 72
108 -102.0 -36.0 84.0 5.14 72
109 -60.0 -90.0 56.0 5.14 36
110 -90.0 -132.0 64.0 5.13 108
111 -111.0 -123.0 108.0 5.12 36
112 -123.0 -102.0 64.0 5.11 36
113 -120.0 -36.0 72.0 5.09 36
114 -105.0 -141.0 24.0 5.06 108
115 -132.0 -141.0 32.0 5.05 36
116 -87.0 -18.0 60.0 5.03 36
117 -132.0 -102.0 96.0 5.03 36
118 -90.0 -96.0 112.0 5.03 36
119 -93.0 -42.0 56.0 5.02 36
120 -99.0 -33.0 84.0 5.01 36
121 -96.0 -147.0 16.0 5.01 36
122 -114.0 -150.0 88.0 5.00 72
123 -75.0 -108.0 112.0 4.98 108
124 -51.0 -75.0 44.0 4.98 72
125 -126.0 -138.0 92.0 4.97 72
126 -45.0 -81.0 64.0 4.97 36
127 -135.0 -54.0 36.0 4.94 36
128 -93.0 -78.0 84.0 4.94 108
129 -81.0 -84.0 24.0 4.94 36
130 -117.0 -114.0 104.0 4.92 72
131 -57.0 -75.0 96.0 4.92 36
132 -123.0 -87.0 40.0 4.91 36
133 -78.0 -48.0 80.0 4.91 72
134 -45.0 -117.0 24.0 4.90 36
135 -54.0 -93.0 56.0 4.89 72
136 -48.0 -135.0 12.0 4.88 36
137 -60.0 -57.0 52.0 4.87 36
138 -51.0 -42.0 64.0 4.86 36
139 -48.0 -102.0 96.0 4.85 36
140 -51.0 -138.0 80.0 4.85 72
141 -129.0 -63.0 84.0 4.84 36
142 -51.0 -141.0 88.0 4.84 36
143 -99.0 -51.0 96.0 4.83 36
144 -102.0 -144.0 12.0 4.82 108
145 -90.0 -141.0 96.0 4.82 36
146 -138.0 -132.0 88.0 4.81 36
147 -90.0 -69.0 96.0 4.80 72
148 -135.0 -126.0 64.0 4.80 36
149 -87.0 -33.0 52.0 4.79 36
150 -51.0 -66.0 36.0 4.78 72
151 -51.0 -78.0 16.0 4.77 36
152 -93.0 -72.0 96.0 4.75 36
153 -96.0 -72.0 84.0 4.75 72
154 -129.0 -57.0 64.0 4.74 36
155 -72.0 -132.0 64.0 4.71 36
156 -63.0 -78.0 40.0 4.71 36
157 -60.0 -90.0 64.0 4.71 36
158 -63.0 -57.0 48.0 4.69 36
159 -60.0 -75.0 40.0 4.68 36
160 -105.0 -93.0 112.0 4.68 36
161 -114.0 -123.0 104.0 4.67 36
162 -87.0 -42.0 64.0 4.67 36
163 -51.0 -75.0 52.0 4.65 36
164 -93.0 -60.0 100.0 4.60 36
165 -75.0 -39.0 80.0 4.60 36
166 -63.0 -54.0 92.0 4.60 36
167 -84.0 -126.0 64.0 4.59 36
168 -48.0 -99.0 80.0 4.59 36
169 -90.0 -141.0 104.0 4.58 36
170 -72.0 -33.0 48.0 4.58 36
171 -99.0 -45.0 92.0 4.57 36
172 -114.0 -147.0 92.0 4.57 36
173 -102.0 -120.0 28.0 4.56 36
174 -138.0 -135.0 48.0 4.55 72
175 -114.0 -111.0 108.0 4.55 72
176 -129.0 -105.0 88.0 4.55 36
177 -60.0 -72.0 96.0 4.54 36
178 -93.0 -150.0 72.0 4.54 36
179 -57.0 -33.0 48.0 4.54 36
180 -81.0 -120.0 52.0 4.53 36
181 -96.0 -138.0 96.0 4.53 36
182 -84.0 -147.0 100.0 4.52 36
183 -117.0 -147.0 88.0 4.52 36
184 -123.0 -144.0 72.0 4.52 36
185 -48.0 -78.0 24.0 4.50 36
186 -111.0 -93.0 108.0 4.49 36
187 -51.0 -135.0 16.0 4.49 36
188 -135.0 -48.0 44.0 4.49 36
189 -126.0 -63.0 52.0 4.48 36
190 -54.0 -63.0 48.0 4.46 36
191 -87.0 -36.0 48.0 4.45 36
192 -111.0 -108.0 112.0 4.45 36
193 -63.0 -114.0 28.0 4.44 36
194 -84.0 -153.0 80.0 4.44 36
195 -33.0 -108.0 72.0 4.43 72
196 -93.0 -108.0 72.0 4.43 36
197 -141.0 -90.0 56.0 4.42 36
198 -84.0 -150.0 16.0 4.41 36
199 -75.0 -147.0 4.0 4.40 36
200 -48.0 -57.0 76.0 4.40 36
201 -132.0 -129.0 92.0 4.39 36
202 -78.0 -60.0 80.0 4.38 36
203 -72.0 -78.0 96.0 4.38 36
204 -54.0 -39.0 48.0 4.37 36
205 -96.0 -144.0 12.0 4.37 72
206 -123.0 -33.0 56.0 4.37 72
207 -69.0 -132.0 68.0 4.36 36
208 -111.0 -114.0 112.0 4.35 36
209 -81.0 -126.0 104.0 4.35 36
210 -117.0 -54.0 72.0 4.35 36
211 -75.0 -150.0 20.0 4.35 36
212 -72.0 -141.0 96.0 4.33 36
213 -96.0 -63.0 80.0 4.33 36
214 -60.0 -87.0 100.0 4.32 36
215 -90.0 -147.0 56.0 4.32 36
216 -60.0 -78.0 100.0 4.32 36
217 -63.0 -72.0 40.0 4.32 36
218 -81.0 -144.0 100.0 4.31 36
219 -126.0 -69.0 92.0 4.30 36
220 -141.0 -120.0 68.0 4.30 36
221 -117.0 -30.0 68.0 4.29 36
222 -120.0 -147.0 72.0 4.28 36
223 -48.0 -120.0 24.0 4.28 36
224 -78.0 -111.0 80.0 4.27 36
225 -135.0 -132.0 40.0 4.27 36
226 -90.0 -123.0 68.0 4.26 36
227 -102.0 -78.0 108.0 4.26 36
228 -45.0 -66.0 64.0 4.25 36
229 -135.0 -129.0 36.0 4.24 36
230 -66.0 -105.0 24.0 4.23 36
231 -129.0 -48.0 72.0 4.23 36
232 -126.0 -48.0 76.0 4.22 36
233 -99.0 -147.0 12.0 4.22 36
234 -60.0 -60.0 60.0 4.22 36
235 -99.0 -144.0 76.0 4.22 36
236 -126.0 -81.0 96.0 4.21 36
237 -138.0 -129.0 84.0 4.21 36
238 -39.0 -75.0 72.0 4.21 36
239 -102.0 -111.0 80.0 4.20 36
240 -72.0 -78.0 104.0 4.20 36
241 -99.0 -48.0 60.0 4.19 36
242 -135.0 -78.0 44.0 4.19 36
243 -129.0 -81.0 48.0 4.18 36
244 -102.0 -135.0 28.0 4.18 36
245 -123.0 -108.0 84.0 4.18 36
246 -114.0 -150.0 28.0 4.18 36
247 -57.0 -132.0 68.0 4.17 36
248 -66.0 -126.0 108.0 4.16 36

About

  • Date preprocessed:

Surface GLM

Nilearn - Statistical Report - First Level Model

Statistical Report - First Level Model Implement the General Linear Model for single run :term:`fMRI` data.

WARNING

  • The model has not been fit yet.

Description

Data were analyzed using Nilearn (version= 0.11.2.dev245+geee20d69f; RRID:SCR_001362).

At the subject level, a mass univariate analysis was performed with a linear regression at each voxel of the brain, using generalized least squares with a global ar1 noise model to account for temporal auto-correlation .

Model details

Value
Parameter
drift_model cosine
high_pass (Hertz) 0.01
hrf_model glover
noise_model ar1
signal_scaling 0
slice_time_ref 0.0
standardize False

Design Matrix

No design matrix was provided.

Contrasts

No contrast was provided.

Mask

No mask was provided.

Statistical Maps

No statistical map was provided.

About

  • Date preprocessed:

Second level report

Volume GLM

Adapted from Voxel-Based Morphometry on OASIS dataset

Nilearn - Statistical Report - Second Level Model

Statistical Report - Second Level Model Implement the :term:`General Linear Model<GLM>` for multiple subject :term:`fMRI` data.

Description

Data were analyzed using Nilearn (version= 0.11.2.dev245+geee20d69f; RRID:SCR_001362).

At the group level, a mass univariate analysis was performed with a linear regression at each voxel of the brain.

Input images were smoothed with gaussian kernel (full-width at half maximum=2.0 mm).

The following contrasts were computed :

  • age
  • sex

Model details

Value
Parameter
smoothing_fwhm (mm) 2.0

Design Matrix

run 0

Plot of design matrix for 0.

correlation matrix

Plot of correlation of design matrix for run 0.

Contrasts

Plot of the contrast age (run 0).
Plot of the contrast sex (run 0).

Mask

Mask image

Statistical Maps

age

Stat map plot for the contrast: age
Cluster Table
Height control None
Threshold Z 3.09
Cluster size threshold (voxels) 0
Minimum distance (mm) 8.0
Cluster ID X Y Z Peak Stat Cluster Size (mm3)
1 -10.0 -66.0 -4.0 4.53 8
2 -2.0 -2.0 -8.0 4.46 8
3 -14.0 -54.0 48.0 4.25 8
4 -20.0 -6.0 -34.0 4.25 8
5 6.0 48.0 34.0 4.14 8
6 50.0 16.0 -4.0 4.09 8
7 -8.0 -18.0 -2.0 3.89 8
8 18.0 26.0 -20.0 3.88 8
9 -2.0 26.0 32.0 3.87 8
10 -44.0 28.0 0.0 3.86 8
11 60.0 -4.0 -8.0 3.79 8
12 0.0 32.0 -2.0 3.78 8
13 32.0 46.0 -18.0 3.78 8
14 -42.0 -64.0 -8.0 3.76 8
15 -26.0 -34.0 14.0 3.75 8
16 -6.0 40.0 -8.0 3.71 8
17 -8.0 -58.0 22.0 3.69 8
18 -42.0 12.0 26.0 3.69 8
19 26.0 -32.0 -10.0 3.68 8
20 46.0 -26.0 -8.0 3.68 8
21 -30.0 18.0 -42.0 3.67 8
22 20.0 66.0 4.0 3.66 8
23 -48.0 8.0 40.0 3.65 8
24 -44.0 16.0 40.0 3.65 8
25 -62.0 -8.0 28.0 3.65 8
26 -60.0 -56.0 20.0 3.64 8
27 -16.0 -48.0 70.0 3.62 8
28 -16.0 70.0 12.0 3.62 8
29 38.0 -74.0 -44.0 3.62 8
30 -2.0 24.0 -12.0 3.60 8
31 -4.0 -6.0 24.0 3.60 8
32 -8.0 52.0 34.0 3.58 8
33 64.0 -50.0 32.0 3.57 8
34 -2.0 10.0 28.0 3.57 8
35 64.0 -26.0 24.0 3.57 8
36 -4.0 -28.0 -2.0 3.57 8
37 56.0 -8.0 40.0 3.56 8
38 16.0 0.0 16.0 3.56 8
39 0.0 -16.0 -36.0 3.55 8
40 -36.0 34.0 50.0 3.55 8
41 6.0 -58.0 0.0 3.54 8
42 22.0 34.0 -24.0 3.54 8
43 -16.0 32.0 -24.0 3.54 8
44 54.0 -44.0 52.0 3.53 8
45 12.0 -8.0 14.0 3.53 8
46 -58.0 -14.0 46.0 3.52 8
47 -10.0 6.0 12.0 3.51 16
48 46.0 -48.0 -20.0 3.50 8
49 -20.0 38.0 -16.0 3.49 8
50 12.0 14.0 2.0 3.48 8
51 0.0 0.0 36.0 3.48 8
52 2.0 -48.0 66.0 3.47 8
53 2.0 -40.0 60.0 3.47 8
54 26.0 64.0 16.0 3.47 8
55 -8.0 -14.0 26.0 3.46 8
56 -46.0 -66.0 -18.0 3.46 8
57 -52.0 -34.0 44.0 3.45 8
58 56.0 -14.0 -32.0 3.45 8
59 2.0 4.0 52.0 3.44 8
60 12.0 -22.0 4.0 3.44 8
61 66.0 -6.0 18.0 3.44 8
62 62.0 -10.0 8.0 3.44 8
63 4.0 22.0 22.0 3.44 8
64 64.0 2.0 -16.0 3.43 8
65 6.0 -46.0 38.0 3.42 8
66 4.0 -56.0 22.0 3.42 8
67 -10.0 -18.0 40.0 3.41 8
68 6.0 -58.0 28.0 3.41 8
69 8.0 -2.0 56.0 3.41 8
70 2.0 0.0 -2.0 3.41 8
71 56.0 -4.0 -32.0 3.41 8
72 -18.0 24.0 52.0 3.41 8
73 0.0 26.0 56.0 3.40 8
74 6.0 -76.0 -2.0 3.39 8
75 -12.0 42.0 -20.0 3.38 8
76 -4.0 -54.0 -8.0 3.38 8
77 -26.0 -30.0 60.0 3.37 8
78 32.0 -22.0 -28.0 3.37 8
79 -6.0 2.0 -16.0 3.36 8
80 -18.0 28.0 -2.0 3.36 8
81 24.0 34.0 40.0 3.36 8
82 30.0 -32.0 -14.0 3.35 8
83 2.0 32.0 -18.0 3.35 8
84 -26.0 32.0 -16.0 3.35 8
85 -18.0 -28.0 -26.0 3.34 8
86 -6.0 -10.0 12.0 3.34 8
87 10.0 -76.0 -48.0 3.34 8
88 34.0 -56.0 -50.0 3.33 8
89 2.0 -34.0 58.0 3.33 8
90 52.0 -18.0 -8.0 3.33 8
91 -2.0 46.0 38.0 3.32 8
92 -2.0 -4.0 14.0 3.32 8
93 60.0 -50.0 2.0 3.32 8
94 42.0 16.0 -46.0 3.32 8
95 30.0 -30.0 -4.0 3.31 8
96 28.0 40.0 42.0 3.31 8
97 -40.0 30.0 42.0 3.31 8
98 2.0 -32.0 -22.0 3.30 8
99 24.0 44.0 28.0 3.30 8
100 -4.0 -30.0 -8.0 3.30 8
101 -20.0 58.0 18.0 3.30 8
102 6.0 -92.0 32.0 3.29 8
103 -28.0 -38.0 16.0 3.29 8
104 12.0 48.0 10.0 3.29 8
105 -6.0 38.0 4.0 3.29 8
106 4.0 -20.0 22.0 3.29 8
107 -6.0 -80.0 36.0 3.28 8
108 -12.0 -44.0 68.0 3.28 8
109 62.0 6.0 -22.0 3.28 8
110 64.0 2.0 26.0 3.28 8
111 8.0 54.0 -22.0 3.27 8
112 -34.0 12.0 -46.0 3.27 8
113 -4.0 -12.0 26.0 3.27 8
114 28.0 -38.0 -26.0 3.27 8
115 -2.0 -18.0 54.0 3.27 8
116 10.0 -16.0 16.0 3.27 8
117 -64.0 -20.0 20.0 3.27 8
118 2.0 34.0 20.0 3.26 8
119 -2.0 20.0 26.0 3.26 8
120 -10.0 -86.0 28.0 3.25 8
121 20.0 -24.0 -4.0 3.25 8
122 0.0 42.0 12.0 3.25 8
123 42.0 -10.0 20.0 3.24 8
124 24.0 0.0 56.0 3.24 8
125 18.0 -26.0 12.0 3.23 8
126 8.0 12.0 62.0 3.23 8
127 4.0 -16.0 -18.0 3.22 8
128 -16.0 10.0 10.0 3.22 8
129 -24.0 -42.0 70.0 3.22 8
130 52.0 -36.0 -4.0 3.21 8
131 -18.0 66.0 8.0 3.21 8
132 22.0 -38.0 -2.0 3.21 8
133 12.0 70.0 6.0 3.21 8
134 24.0 4.0 66.0 3.21 8
135 -66.0 -20.0 32.0 3.20 8
136 44.0 -2.0 56.0 3.20 8
137 -58.0 4.0 -18.0 3.20 8
138 -4.0 -48.0 -8.0 3.20 8
139 54.0 -18.0 28.0 3.20 8
140 -10.0 4.0 66.0 3.19 8
141 8.0 14.0 -12.0 3.19 8
142 6.0 -58.0 -16.0 3.19 8
143 10.0 10.0 12.0 3.19 8
144 -50.0 -8.0 -12.0 3.19 8
145 54.0 -16.0 34.0 3.19 8
146 -40.0 -66.0 50.0 3.19 8
147 -2.0 -46.0 66.0 3.18 8
148 -42.0 16.0 -12.0 3.18 8
149 -14.0 -38.0 14.0 3.18 8
150 66.0 -10.0 18.0 3.18 8
151 -24.0 -44.0 -2.0 3.18 8
152 42.0 24.0 -6.0 3.18 8
153 -60.0 -14.0 36.0 3.18 8
154 56.0 -4.0 -8.0 3.18 8
155 -20.0 -26.0 14.0 3.17 8
156 30.0 -40.0 8.0 3.17 8
157 6.0 8.0 30.0 3.17 8
158 4.0 -40.0 78.0 3.17 8
159 16.0 34.0 56.0 3.17 8
160 68.0 -4.0 14.0 3.17 8
161 24.0 -74.0 44.0 3.17 8
162 32.0 -38.0 -28.0 3.17 8
163 -36.0 -62.0 38.0 3.16 8
164 34.0 34.0 46.0 3.16 8
165 -16.0 -40.0 8.0 3.16 8
166 10.0 -86.0 34.0 3.16 8
167 10.0 -32.0 18.0 3.15 8
168 -6.0 -46.0 28.0 3.15 8
169 -42.0 -30.0 46.0 3.15 8
170 -36.0 6.0 44.0 3.15 8
171 58.0 -52.0 4.0 3.15 8
172 10.0 0.0 14.0 3.15 8
173 -38.0 -14.0 -42.0 3.15 8
174 2.0 -54.0 32.0 3.15 8
175 16.0 58.0 32.0 3.15 8
176 -8.0 -10.0 26.0 3.14 8
177 56.0 -18.0 34.0 3.14 8
178 40.0 22.0 -6.0 3.14 8
179 40.0 -28.0 40.0 3.14 8
180 54.0 -14.0 -14.0 3.14 8
181 44.0 14.0 44.0 3.14 8
182 -28.0 -76.0 -58.0 3.13 8
183 14.0 -28.0 14.0 3.13 8
184 36.0 24.0 4.0 3.13 8
185 -2.0 12.0 30.0 3.13 8
186 48.0 -42.0 24.0 3.13 8
187 -46.0 -24.0 10.0 3.13 8
188 -42.0 4.0 -6.0 3.13 8
189 -32.0 -34.0 46.0 3.13 8
190 -14.0 -10.0 10.0 3.13 8
191 -26.0 -10.0 -46.0 3.12 8
192 -42.0 10.0 -8.0 3.12 8
193 44.0 -40.0 50.0 3.11 8
194 -60.0 -40.0 -26.0 3.11 8
195 2.0 10.0 56.0 3.11 8
196 32.0 34.0 -14.0 3.11 8
197 -42.0 -66.0 54.0 3.11 8
198 -22.0 -46.0 70.0 3.11 8
199 -28.0 -34.0 -10.0 3.10 8
200 6.0 26.0 54.0 3.10 8
201 14.0 -48.0 -6.0 3.10 8
202 -28.0 30.0 -22.0 3.10 8
203 2.0 -34.0 2.0 3.10 8
204 -10.0 -54.0 68.0 3.10 8
205 -58.0 -2.0 8.0 3.10 8
206 16.0 -6.0 -34.0 3.10 8
207 14.0 -28.0 -22.0 3.09 8
208 10.0 34.0 42.0 3.09 8
209 34.0 -94.0 6.0 3.09 8
210 18.0 -6.0 22.0 3.09 8
211 14.0 -76.0 -36.0 3.09 8

sex

Stat map plot for the contrast: sex
Cluster Table
Height control None
Threshold Z 3.09
Cluster size threshold (voxels) 0
Minimum distance (mm) 8.0
Cluster ID X Y Z Peak Stat Cluster Size (mm3)
1 -34.0 -10.0 -18.0 4.73 8
2 -4.0 -22.0 18.0 4.62 8
3 52.0 32.0 0.0 4.27 8
4 -40.0 -76.0 -24.0 4.20 8
5 38.0 -74.0 -44.0 4.14 16
6 24.0 -74.0 -48.0 4.10 8
7 2.0 -44.0 -56.0 3.98 8
8 -24.0 -90.0 8.0 3.89 8
9 -30.0 -72.0 -24.0 3.87 8
10 -24.0 -78.0 -38.0 3.86 8
11 -4.0 46.0 -26.0 3.80 8
12 -12.0 8.0 20.0 3.78 8
13 32.0 6.0 32.0 3.75 8
14 -20.0 -78.0 -44.0 3.73 8
15 -58.0 -8.0 48.0 3.72 8
16 10.0 -34.0 -28.0 3.72 8
17 44.0 -66.0 -40.0 3.72 8
18 -36.0 -76.0 -28.0 3.71 8
19 -2.0 -44.0 -54.0 3.68 8
20 8.0 -82.0 -36.0 3.67 8
21 -12.0 -34.0 -28.0 3.67 8
22 -14.0 -74.0 -46.0 3.66 8
23 64.0 -32.0 -24.0 3.66 8
24 20.0 -70.0 -52.0 3.65 8
25 -38.0 2.0 30.0 3.65 8
26 -16.0 -74.0 -48.0 3.64 8
27 -40.0 32.0 -8.0 3.62 8
28 -2.0 -32.0 -20.0 3.62 8
29 2.0 52.0 18.0 3.60 8
30 -46.0 -64.0 -34.0 3.59 8
31 -24.0 -72.0 -36.0 3.59 16
32 -18.0 -80.0 -42.0 3.59 8
33 -16.0 -28.0 36.0 3.59 8
34 -24.0 -94.0 10.0 3.59 8
35 16.0 64.0 -14.0 3.59 8
36 24.0 -68.0 -40.0 3.58 16
37 -58.0 -2.0 48.0 3.58 8
38 10.0 -76.0 -48.0 3.58 8
39 -6.0 -52.0 -56.0 3.57 8
40 40.0 -70.0 -32.0 3.56 8
41 30.0 -80.0 -36.0 3.56 8
42 40.0 -66.0 -38.0 3.53 8
43 -36.0 -8.0 -26.0 3.51 8
44 -48.0 -52.0 56.0 3.50 8
45 -34.0 -38.0 -14.0 3.50 8
46 0.0 -2.0 18.0 3.50 8
47 42.0 -60.0 -42.0 3.50 8
48 34.0 -62.0 -40.0 3.48 8
49 -6.0 -18.0 62.0 3.48 8
50 22.0 -64.0 -28.0 3.48 8
51 -4.0 -8.0 20.0 3.47 8
52 -16.0 -74.0 -42.0 3.46 8
53 -8.0 0.0 40.0 3.46 8
54 -38.0 -74.0 -28.0 3.46 8
55 -40.0 34.0 28.0 3.46 8
56 28.0 -70.0 -36.0 3.45 8
57 42.0 -46.0 -22.0 3.45 8
58 -10.0 -8.0 38.0 3.44 8
59 -16.0 -74.0 -32.0 3.44 8
60 54.0 36.0 -10.0 3.43 8
61 -32.0 -66.0 -38.0 3.43 8
62 26.0 2.0 12.0 3.43 8
63 -16.0 -34.0 -46.0 3.42 8
64 -10.0 -76.0 -38.0 3.42 16
65 36.0 -54.0 40.0 3.42 8
66 38.0 -52.0 -46.0 3.42 8
67 -16.0 -78.0 44.0 3.41 8
68 -34.0 -76.0 36.0 3.41 8
69 -8.0 34.0 46.0 3.41 8
70 -10.0 20.0 8.0 3.41 8
71 -36.0 -66.0 -56.0 3.40 8
72 -26.0 -2.0 -12.0 3.40 8
73 32.0 -92.0 -8.0 3.39 8
74 -22.0 -72.0 -44.0 3.39 8
75 -58.0 0.0 38.0 3.39 8
76 34.0 -34.0 -38.0 3.37 8
77 -34.0 -54.0 -48.0 3.37 8
78 38.0 -18.0 46.0 3.36 8
79 20.0 -74.0 -44.0 3.36 8
80 34.0 -72.0 -36.0 3.36 8
81 20.0 50.0 46.0 3.36 8
82 -30.0 -58.0 -28.0 3.35 8
83 60.0 -36.0 -2.0 3.34 8
84 10.0 -70.0 -46.0 3.34 16
85 38.0 38.0 6.0 3.33 8
86 34.0 -60.0 -30.0 3.33 8
87 24.0 -52.0 10.0 3.33 8
88 18.0 -80.0 -26.0 3.32 8
89 -14.0 2.0 24.0 3.32 8
90 -40.0 -20.0 48.0 3.31 8
91 12.0 -78.0 -48.0 3.30 8
92 32.0 -78.0 -36.0 3.30 8
93 -34.0 -68.0 -28.0 3.30 8
94 30.0 -64.0 -4.0 3.29 8
95 2.0 -80.0 -10.0 3.29 16
96 42.0 -50.0 -44.0 3.29 8
97 8.0 -84.0 -12.0 3.29 8
98 16.0 -70.0 -52.0 3.27 8
99 -38.0 24.0 -24.0 3.26 8
100 -26.0 4.0 48.0 3.26 8
101 28.0 -84.0 22.0 3.26 8
102 -16.0 -82.0 -28.0 3.24 8
103 -36.0 -40.0 58.0 3.23 8
104 -44.0 -10.0 6.0 3.23 8
105 -14.0 -44.0 -46.0 3.23 8
106 14.0 -72.0 -46.0 3.23 8
107 34.0 -48.0 0.0 3.22 8
108 -14.0 42.0 20.0 3.21 8
109 48.0 -18.0 58.0 3.21 8
110 -10.0 10.0 18.0 3.20 8
111 16.0 -66.0 -46.0 3.20 8
112 -40.0 -48.0 -36.0 3.20 8
113 2.0 -82.0 -16.0 3.20 8
114 -46.0 -6.0 0.0 3.19 8
115 36.0 34.0 12.0 3.19 8
116 20.0 -86.0 -14.0 3.19 8
117 -42.0 -4.0 56.0 3.19 8
118 -10.0 -24.0 20.0 3.18 8
119 34.0 -56.0 -50.0 3.18 8
120 0.0 -24.0 46.0 3.17 8
121 -16.0 -70.0 -30.0 3.17 8
122 18.0 -66.0 -32.0 3.17 8
123 38.0 -44.0 -16.0 3.17 8
124 -32.0 -70.0 -56.0 3.17 8
125 40.0 -60.0 44.0 3.16 8
126 34.0 12.0 34.0 3.16 8
127 62.0 -38.0 4.0 3.16 8
128 36.0 -66.0 -42.0 3.15 8
129 40.0 -64.0 -44.0 3.15 8
130 -6.0 -42.0 8.0 3.15 8
131 -28.0 -8.0 -12.0 3.15 8
132 -14.0 16.0 34.0 3.15 8
133 32.0 -58.0 -44.0 3.15 8
134 -22.0 -94.0 -10.0 3.14 8
135 22.0 -80.0 -50.0 3.14 8
136 54.0 -4.0 50.0 3.14 8
137 12.0 -58.0 -34.0 3.13 8
138 40.0 -64.0 -36.0 3.13 8
139 -6.0 -14.0 22.0 3.13 8
140 -48.0 -8.0 54.0 3.13 8
141 12.0 -78.0 10.0 3.13 8
142 2.0 -44.0 -44.0 3.13 8
143 24.0 -16.0 12.0 3.12 8
144 -16.0 -70.0 -6.0 3.12 8
145 -28.0 -22.0 58.0 3.11 8
146 -34.0 -76.0 -36.0 3.11 16
147 -36.0 -60.0 -56.0 3.11 8
148 -46.0 -8.0 34.0 3.11 8
149 18.0 -50.0 -62.0 3.11 8
150 -20.0 -42.0 -10.0 3.11 8
151 -18.0 -32.0 -28.0 3.10 8
152 -52.0 -4.0 -38.0 3.10 8
153 28.0 -56.0 10.0 3.10 8
154 44.0 -62.0 -42.0 3.10 8
155 -32.0 -68.0 -58.0 3.10 8
156 -40.0 -66.0 -26.0 3.10 8
157 40.0 -64.0 10.0 3.10 8
158 24.0 -80.0 -38.0 3.09 8
159 34.0 -76.0 -24.0 3.09 8

About

  • Date preprocessed:

Surface GLM

Nilearn - Statistical Report - Second Level Model

Statistical Report - Second Level Model Implement the :term:`General Linear Model<GLM>` for multiple subject :term:`fMRI` data.

WARNING

  • The model has not been fit yet.

Description

Data were analyzed using Nilearn (version= 0.11.2.dev245+geee20d69f; RRID:SCR_001362).

At the group level, a mass univariate analysis was performed with a linear regression at each voxel of the brain.

Model details

Design Matrix

No design matrix was provided.

Contrasts

No contrast was provided.

Mask

No mask was provided.

Statistical Maps

No statistical map was provided.

About

  • Date preprocessed: