ICBM 152 template

Access

See nilearn.datasets.fetch_icbm152_2009,

nilearn.datasets.fetch_icbm152_brain_gm_mask, nilearn.datasets.load_mni152_template: to load MNI152 T1 template, nilearn.datasets.load_mni152_gm_template: to load MNI152 grey matter template, nilearn.datasets.load_mni152_wm_template: to load MNI152 white matter template, nilearn.datasets.load_mni152_brain_mask: to load MNI152 whole brain mask, nilearn.datasets.load_mni152_gm_mask: to load MNI152 grey matter mask, and nilearn.datasets.load_mni152_wm_mask: to load MNI152 white matter mask.

Notes

References atlases intended for spatial normalization, registration, and segmentation of MRI data. These atlases were generated from large ensembles of MRI data in an unbiased fashion. MRI data from templates are derived from “a truly normal, well characterized population.”

See Collins et al.[1], Fonov et al.[2] and Fonov et al.[3].

Content

‘csf’:

probabilistic map for cerebrospinal fluid

‘gm’:

probabilistic map for gray matter

‘wm’:

probabilistic map for white matter

‘pd’:

proton density-weighted anatomical templates (non-linear average)

‘t1’:

T1-weighted anatomical template (non-linear average)

‘t2’:

T2-weighted anatomical template (non-linear average)

‘t2_relax’:

T2-weighted/relaxed anatomical template

‘eye_mask’:

average mask for eyes

‘face_mask’:

average mask for face

‘mask’:

average mask for brain

References

[1]

D. Louis Collins, Alex P. Zijdenbos, Wim F. C. Baaré, and Alan C. Evans. Animal+insect: improved cortical structure segmentation. In Attila Kuba, Martin Šáamal, and Andrew Todd-Pokropek, editors, Information Processing in Medical Imaging, 210–223. Berlin, Heidelberg, 1999. Springer Berlin Heidelberg.

[2]

VS Fonov, AC Evans, RC McKinstry, CR Almli, and DL Collins. Unbiased nonlinear average age-appropriate brain templates from birth to adulthood. NeuroImage, 47(Supplement 1):S102, 2009. doi:10.1016/S1053-8119(09)70884-5.

[3]

Vladimir Fonov, Alan C. Evans, Kelly Botteron, C. Robert Almli, Robert C. McKinstry, and D. Louis Collins. Unbiased average age-appropriate atlases for pediatric studies. NeuroImage, 54(1):313–327, 2011. URL: https://www.sciencedirect.com/science/article/pii/S1053811910010062, doi:https://doi.org/10.1016/j.neuroimage.2010.07.033.

For more information see: http://www.bic.mni.mcgill.ca/ServicesAtlases/ICBM152NLin2009

License

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