.. DO NOT EDIT. .. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY. .. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE: .. "auto_examples/07_advanced/plot_age_group_prediction_cross_val.py" .. LINE NUMBERS ARE GIVEN BELOW. .. only:: html .. note:: :class: sphx-glr-download-link-note :ref:`Go to the end ` to download the full example code. or to run this example in your browser via Binder .. rst-class:: sphx-glr-example-title .. _sphx_glr_auto_examples_07_advanced_plot_age_group_prediction_cross_val.py: Functional connectivity predicts age group ========================================== This example compares different kinds of :term:`functional connectivity`: correlation, partial correlation, and tangent space embedding. The resulting connectivity coefficients are then used to classify participants by age group; i.e., children or adults. This is a small example to showcase Nilearn features; see :footcite:t:`Dadi2019` for a careful study. .. GENERATED FROM PYTHON SOURCE LINES 15-19 Load brain development :term:`fMRI` dataset ------------------------------------------- To save computation time, we will use only a subset of subjects from the :func:`~nilearn.datasets.fetch_development_fmri` dataset. .. GENERATED FROM PYTHON SOURCE LINES 19-23 .. code-block:: Python from nilearn.datasets import fetch_atlas_msdl, fetch_development_fmri development_dataset = fetch_development_fmri(n_subjects=60) .. rst-class:: sphx-glr-script-out .. code-block:: none [fetch_development_fmri] Dataset directory found: /home/runner/work/nilearn/nilearn/nilearn_data/development_fmri .. GENERATED FROM PYTHON SOURCE LINES 24-35 Load Multi-Subject Dictionary Learning (MSDL) atlas and extract time series --------------------------------------------------------------------------- We use probabilistic regions of interest (ROIs) defined using the :func:`~nilearn.datasets.fetch_atlas_msdl` atlas. We then use the :class:`~nilearn.maskers.MultiNiftiMapsMasker` object to extract time series from the pre-defined ROIs for each subject. We could instead do this iteratively for each subject using :class:`~nilearn.maskers.NiftiMapsMasker` objects, but :class:`~nilearn.maskers.MultiNiftiMapsMasker` allows to extract time series for all subjects in a single step. .. GENERATED FROM PYTHON SOURCE LINES 35-57 .. code-block:: Python from nilearn.maskers import MultiNiftiMapsMasker msdl_data = fetch_atlas_msdl() masker = MultiNiftiMapsMasker( msdl_data.maps, resampling_target="data", t_r=development_dataset.t_r, detrend=True, low_pass=0.1, high_pass=0.01, memory="nilearn_cache", memory_level=1, standardize_confounds=True, standardize="zscore_sample", verbose=1, ) masked_data = masker.fit_transform( development_dataset.func, confounds=development_dataset.confounds ) .. rst-class:: sphx-glr-script-out .. code-block:: none [fetch_atlas_msdl] Dataset directory found: /home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas [MultiNiftiMapsMasker.fit_transform] Loading data from [ sub-pixar135_task-..., ... sub-pixar030_task-..., ] [MultiNiftiMapsMasker.fit_transform] Loading regions from .../msdl_rois.nii [MultiNiftiMapsMasker.fit_transform] Resampling regions [MultiNiftiMapsMasker.fit_transform] Finished fit ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar135_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar135_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar123_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar123_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar124_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar124_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar125_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar125_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar126_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar126_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar127_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar127_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar134_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar134_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar129_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar129_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar130_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar130_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar131_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar131_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar132_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar132_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar133_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar133_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar128_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar128_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar032_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar032_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar033_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar033_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar034_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar034_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar035_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar035_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar036_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar036_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar037_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar037_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar038_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar038_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar041_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar041_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar040_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar040_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar042_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar042_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar043_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar043_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar044_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar044_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar031_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar031_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar046_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar046_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar047_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar047_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar039_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar039_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar045_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar045_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar001_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar001_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar028_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar028_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar002_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar002_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar003_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar003_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar004_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar004_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar005_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar005_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar006_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar006_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar007_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar007_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar008_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar008_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar009_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar009_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar010_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar010_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar011_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar011_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar012_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar012_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar013_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar013_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar029_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar029_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar014_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar014_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar016_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar016_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar017_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar017_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar018_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar018_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar019_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar019_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar020_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar020_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar021_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar021_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar022_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar022_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar023_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar023_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar024_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar024_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar025_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar025_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar026_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar026_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 1.0s, 0.0min ____________________________________________transform_single_imgs - 1.4s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar027_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar027_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar015_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar015_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min ________________________________________________________________________________ [Memory] Calling nilearn.maskers.nifti_maps_masker.transform_single_imgs... transform_single_imgs(imgs=, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar030_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None) ________________________________________________________________________________ [Memory] Calling nilearn.maskers.base_masker.filter_and_extract... filter_and_extract(, , { 'allow_overlap': True, 'clean_args': None, 'clean_kwargs': {}, 'cmap': 'CMRmap_r', 'detrend': True, 'dtype': None, 'high_pass': 0.01, 'high_variance_confounds': False, 'keep_masked_maps': False, 'low_pass': 0.1, 'maps_img': '/home/runner/work/nilearn/nilearn/nilearn_data/msdl_atlas/MSDL_rois/msdl_rois.nii', 'mask_img': None, 'reports': True, 'smoothing_fwhm': None, 'standardize': 'zscore_sample', 'standardize_confounds': True, 't_r': 2, 'target_affine': None, 'target_shape': None}, confounds='/home/runner/work/nilearn/nilearn/nilearn_data/development_fmri/sub-pixar030_task-pixar_desc-reducedConfounds_regressors.tsv', sample_mask=None, memory=Memory(location=nilearn_cache/joblib), memory_level=1, verbose=1, sklearn_output_config=None) [MultiNiftiMapsMasker.fit_transform] Loading data from [MultiNiftiMapsMasker.fit_transform] Extracting region signals [MultiNiftiMapsMasker.fit_transform] Cleaning extracted signals _______________________________________________filter_and_extract - 0.9s, 0.0min ____________________________________________transform_single_imgs - 1.3s, 0.0min .. GENERATED FROM PYTHON SOURCE LINES 58-75 What kind of connectivity is most powerful for classification? -------------------------------------------------------------- We will next define connectivity matrices using :func:`~nilearn.connectome.ConnectivityMeasure` so that we can use each matrix as features in our classification analysis. Since our goal is to compare different kinds of connectivity, we will define three different kinds of connectivity matrices, (i.e., "correlation", "partial correlation", "tangent") using the ``kind`` parameter. To do this, we will use a scikit-learn :class:`~sklearn.pipeline.Pipeline` to combine the connectivity measure and the classifier into a single object. Specifically, we will create a composite estimator with :func:`~nilearn.connectome.ConnectivityMeasure` and :class:`sklearn.model_selection.GridSearchCV` to perform a grid search over the ``C`` regularization parameter for our classifier, a :class:`sklearn.svm.LinearSVC`. .. GENERATED FROM PYTHON SOURCE LINES 75-110 .. code-block:: Python # prepare the classification pipeline from sklearn.dummy import DummyClassifier from sklearn.model_selection import GridSearchCV from sklearn.pipeline import Pipeline from sklearn.svm import LinearSVC from nilearn.connectome import ConnectivityMeasure kinds = ["correlation", "partial correlation", "tangent"] pipe = Pipeline( [ ( "connectivity", ConnectivityMeasure( vectorize=True, ), ), ( "classifier", GridSearchCV( LinearSVC(dual=True, random_state=0), {"C": [0.1, 1.0, 10.0]}, cv=5, ), ), ] ) param_grid = [ {"classifier": [DummyClassifier(strategy="most_frequent")]}, {"connectivity__kind": kinds}, ] .. GENERATED FROM PYTHON SOURCE LINES 111-123 Rather than evaluating on the whole sample of 60 subjects, we want to cross-validate our model. We can directly pass the Pipeline object we defined above to a cross-validation estimator. Given the unbalanced sampling of age groups in :func:`~nilearn.datasets.fetch_development_fmri`, we will use stratified cross-validation to preserve the proportion of each age group in the training and testing sets. We will define 30 random, stratified splits of the subjects into training and testing sets, using :class:`sklearn.model_selection.StratifiedShuffleSplit`. .. GENERATED FROM PYTHON SOURCE LINES 123-143 .. code-block:: Python from sklearn.model_selection import StratifiedShuffleSplit from sklearn.preprocessing import LabelEncoder groups = development_dataset.phenotypic["Child_Adult"].to_list() classes = LabelEncoder().fit_transform(groups) cv = StratifiedShuffleSplit(n_splits=30, random_state=0, test_size=10) gs = GridSearchCV( pipe, param_grid, scoring="accuracy", cv=cv, refit=False, n_jobs=2, ) gs.fit(masked_data, classes) mean_scores = gs.cv_results_["mean_test_score"] scores_std = gs.cv_results_["std_test_score"] .. GENERATED FROM PYTHON SOURCE LINES 144-145 Finally, we display the classification accuracy results: .. GENERATED FROM PYTHON SOURCE LINES 145-158 .. code-block:: Python import matplotlib.pyplot as plt plt.figure(figsize=(6, 4), constrained_layout=True) positions = [0.1, 0.2, 0.3, 0.4] plt.barh(positions, mean_scores, align="center", height=0.05, xerr=scores_std) yticks = ["dummy", *list(gs.cv_results_["param_connectivity__kind"].data[1:])] yticks = [t.replace(" ", "\n") for t in yticks] plt.yticks(positions, yticks) plt.xlabel("Classification accuracy") plt.gca().grid(True) plt.gca().set_axisbelow(True) .. image-sg:: /auto_examples/07_advanced/images/sphx_glr_plot_age_group_prediction_cross_val_001.png :alt: plot age group prediction cross val :srcset: /auto_examples/07_advanced/images/sphx_glr_plot_age_group_prediction_cross_val_001.png :class: sphx-glr-single-img .. GENERATED FROM PYTHON SOURCE LINES 159-165 This is a small example to showcase Nilearn features. In practice, such comparisons need to be performed on much larger cohorts and replicated across several datasets. :footcite:t:`Dadi2019` showed that across many cohorts and clinical questions, tangent functional connectivity should be preferred. .. GENERATED FROM PYTHON SOURCE LINES 165-168 .. code-block:: Python plt.show() .. GENERATED FROM PYTHON SOURCE LINES 169-173 References ---------- .. footbibliography:: .. rst-class:: sphx-glr-timing **Total running time of the script:** (2 minutes 5.201 seconds) **Estimated memory usage:** 11926 MB .. _sphx_glr_download_auto_examples_07_advanced_plot_age_group_prediction_cross_val.py: .. only:: html .. container:: sphx-glr-footer sphx-glr-footer-example .. container:: binder-badge .. image:: images/binder_badge_logo.svg :target: https://mybinder.org/v2/gh/nilearn/nilearn/0.14.1?urlpath=lab/tree/notebooks/auto_examples/07_advanced/plot_age_group_prediction_cross_val.ipynb :alt: Launch binder :width: 150 px .. container:: sphx-glr-download sphx-glr-download-jupyter :download:`Download Jupyter notebook: plot_age_group_prediction_cross_val.ipynb ` .. container:: sphx-glr-download sphx-glr-download-python :download:`Download Python source code: plot_age_group_prediction_cross_val.py ` .. container:: sphx-glr-download sphx-glr-download-zip :download:`Download zipped: plot_age_group_prediction_cross_val.zip ` .. only:: html .. rst-class:: sphx-glr-signature `Gallery generated by Sphinx-Gallery `_