Note
Click here to download the full example code or to run this example in your browser via Binder
9.2.2. Glass brain plotting in nilearn¶
See Plotting brain images for more plotting functionalities.
9.2.2.1. Retrieve data from Internet¶
from nilearn import datasets
motor_images = datasets.fetch_neurovault_motor_task()
stat_img = motor_images.images[0]
9.2.2.2. Glass brain plotting: whole brain sagittal cuts¶
from nilearn import plotting
plotting.plot_glass_brain(stat_img, threshold=3)
Out:
<nilearn.plotting.displays.OrthoProjector object at 0x7fc6a7f75df0>
9.2.2.3. Glass brain plotting: black background¶
On a black background (option “black_bg”), and with only the x and the z view (option “display_mode”).
plotting.plot_glass_brain(
stat_img, title='plot_glass_brain',
black_bg=True, display_mode='xz', threshold=3)
Out:
<nilearn.plotting.displays.XZProjector object at 0x7fc6a7e2f2e0>
9.2.2.4. Glass brain plotting: Hemispheric sagittal cuts¶
plotting.plot_glass_brain(stat_img,
title='plot_glass_brain with display_mode="lyrz"',
display_mode='lyrz', threshold=3)
plotting.show()
Total running time of the script: ( 0 minutes 2.923 seconds)
